Revealing the ecological content of long-duration audio-recordings of the environment through clustering and visualisation

Publication Type:Journal Article
Year of Publication:2018
Authors:Phillips, Roe
Journal:PLOS ONE
Volume:13
Issue:3
Pagination:e0193345
Date Published:Jan-03-2018
Abstract:

Audio recordings of the environment are an increasingly important technique to monitor biodiversity and ecosystem function. While the acquisition of long-duration recordings is becoming easier and cheaper, the analysis and interpretation of that audio remains a significant research area. The issue addressed in this paper is the automated reduction of environmental audio data to facilitate ecological investigations. We describe a method that first reduces environmental audio to vectors of acoustic indices, which are then clustered. This can reduce the audio data by six to eight orders of magnitude yet retain useful ecological information. We describe techniques to visualise sequences of cluster occurrence (using for example, diel plots, rose plots) that assist interpretation of environmental audio. Colour coding acoustic clusters allows months and years of audio data to be visualised in a single image. These techniques are useful in identifying and indexing the contents of long-duration audio recordings. They could also play an important role in monitoring long-term changes in species abundance brought about by habitat degradation and/or restoration.

URL:http://dx.plos.org/10.1371/journal.pone.0193345
DOI:10.1371/journal.pone.0193345
Short Title:PLoS ONE
BioAcoustica ID: 
Non biological: 
Scratchpads developed and conceived by (alphabetical): Ed Baker, Katherine Bouton Alice Heaton Dimitris Koureas, Laurence Livermore, Dave Roberts, Simon Rycroft, Ben Scott, Vince Smith